Protein ZmNLP5
ZmNLP5 is a protein in the NLP family.
Information
TF Name: ZmNLP5
Species: Maize
TF Family: NLP
Gene Name(Synonym): NLP5
Uniprot ID: A0A1D6PDQ1

Protein ZmNLP5

ZmNLP5 is a protein in the NLP family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d011142DAPseq no logo sequence fimo position
Zm00001d011142DAPseq no logo sequence fimo position
Zm00001d011142ChIPseq no logo sequence fimo position
Zm00001d011142PChIPseq no logo sequence fimo position

Interactions where ZmNLP5 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmNLP5 is the target  
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There are 63 protein-dna interactions that fit this criteria. download excel sheet

Zm00001d011142_T001 from maize genome v4

Amino Acid Sequence
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MAMVPCGDDTDWCHVLDNFNLLLCSSSCSPNAMANRAEDCLPISAAPPGPGHHQSCCKNEVVLEASCDGAFAAADCLSSA
LTNLQREDDSFYLPMYSAPPAVGDEYFSDLLAPDADGIDEALLMPFSDIDLQVFDSDDEHRPPVDQMVNMIPPAVLHHPS
TAGTQNGGAVHAHQKAMAVIDDSCFRRGASGVEMAVVRHHGEPRQGSSSVAPVPPPSLPGTRARRSDGRSARAGKTTKLD
YIGFDELRKYFCMPITRAAREMNVGLTVLKKRCRELGVARWPHRKMKSLKSLMANVQEMGNVMSSVAVQQELAALETYCT
LMEDNPWIELTDRTKKLRQACFKERYKRRRAAEVNVMDMDRIYCFGQHHHQQLLPPTTSSSDDRHGQCSRSFGY

MAMVPCGDDTDWCHVLDNFNLLLCSSSCSPNAMANRAEDCLPISAAPPGPGHHQSCCKNEVVLEASCDGAFAAADCLSSA
LTNLQREDDSFYLPMYSAPPAVGDEYFSDLLAPDADGIDEALLMPFSDIDLQVFDSDDEHRPPVDQMVNMIPPAVLHHPS
TAGTQNGGAVHAHQKAMAVIDDSCFRRGASGVEMAVVRHHGEPRQGSSSVAPVPPPSLPGTRARRSDGRSARAGKTTKLD
YIGFDELRKYFCMPITRAAREMNVGLTVLKKRCRELGVARWPHRKMKSLKSLMANVQEMGNVMSSVAVQQELAALETYCT
LMEDNPWIELTDRTKKLRQACFKERYKRRRAAEVNVMDMDRIYCFGQHHHQQLLPPTTSSSDDRHGQCSRSFGY

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available

Nucleotide Sequence
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ATGGCGATGGTGCCATGCGGCGATG...


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